WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F39H2.4.2 Sequence Name  F39H2.4.2
Length (nt)  934   Chromosome Location  I: 8663045-8664445
Chromosome . Primary Identifier  I Chromosome Location . Start  8663045
Chromosome Location . End  8664445 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F39H2.4.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006377 syp-3 F39H2.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F39H2.4 F39H2.4 675   I: 8663234-8663436

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F39H2.4.2 8663045 8664445 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon22749   392   I: 8663045-8663436 Caenorhabditis elegans
Exon22752   67   I: 8663483-8663549 Caenorhabditis elegans
Exon22754   254   I: 8663614-8663867 Caenorhabditis elegans
Exon22756   48   I: 8663911-8663958 Caenorhabditis elegans
Exon22758   109   I: 8664012-8664120 Caenorhabditis elegans
Exon22759   64   I: 8664382-8664445 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F39H2.4.2 8663045 8664445 -1

1 Sequence

Length
934

1 Sequence Ontology Term

Identifier Name Description
transcript