WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F39H2.4 Sequence Name  F39H2.4
Length (nt)  675   Chromosome Location  I: 8663234-8663436
Chromosome . Primary Identifier  I Chromosome Location . Start  8663234
Chromosome Location . End  8663436
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F39H2.4

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE41238 SYP-3 25.8 224 Caenorhabditis elegans
 

Other

13 RNAi

WormBase ID
WBRNAi00046805
WBRNAi00003643
WBRNAi00103808
WBRNAi00077848
WBRNAi00032000
WBRNAi00000833
WBRNAi00007843
WBRNAi00112474
WBRNAi00112471
WBRNAi00112477
WBRNAi00112465
WBRNAi00112468
WBRNAi00103809

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F39H2.4 8663234 8663436 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006377 syp-3 F39H2.4 Caenorhabditis elegans

5 Locations


Feature . Primary Identifier
Start End Strand
CDS:F39H2.4 8663234 8663436 -1
CDS:F39H2.4 8663483 8663549 -1
CDS:F39H2.4 8663614 8663867 -1
CDS:F39H2.4 8663911 8663958 -1
CDS:F39H2.4 8664012 8664114 -1

1 Sequence

Length
675

1 Sequence Ontology Term

Identifier Name Description
CDS  

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F39H2.4.2 F39H2.4.2 934   I: 8663045-8664445
Transcript:F39H2.4.1 F39H2.4.1 867   I: 8663048-8664120