WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K07A12.2.1 Sequence Name  K07A12.2.1
Length (nt)  3383   Chromosome Location  I: 8676666-8681325
Chromosome . Primary Identifier  I Chromosome Location . Start  8676666
Chromosome Location . End  8681325 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K07A12.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010621 egg-6 K07A12.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K07A12.2 K07A12.2 2886   I: 8677075-8677297

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K07A12.2.1 8676666 8681325 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon22784   632   I: 8676666-8677297 Caenorhabditis elegans
Exon22785   1019   I: 8677375-8678393 Caenorhabditis elegans
Exon22786   669   I: 8678455-8679123 Caenorhabditis elegans
Exon22787   120   I: 8679186-8679305 Caenorhabditis elegans
Exon22788   355   I: 8679350-8679704 Caenorhabditis elegans
Exon22789   89   I: 8679751-8679839 Caenorhabditis elegans
Exon22790   120   I: 8680032-8680151 Caenorhabditis elegans
Exon22792   192   I: 8680899-8681090 Caenorhabditis elegans
Exon22793   187   I: 8681139-8681325 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K07A12.2.1 8676666 8681325 -1

1 Sequence

Length
3383

1 Sequence Ontology Term

Identifier Name Description
transcript