WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:K07A12.6 Sequence Name  K07A12.6
Length (nt)  543   Chromosome Location  I: 8683220-8683512
Chromosome . Primary Identifier  I Chromosome Location . Start  8683220
Chromosome Location . End  8683512
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K07A12.6

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE11874 HOT-5 20.8 180 Caenorhabditis elegans
 

Other

3 RNAi

WormBase ID
WBRNAi00050101
WBRNAi00003951
WBRNAi00033411

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:K07A12.6 8683220 8683512 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001990 hot-5 K07A12.6 Caenorhabditis elegans

4 Locations


Feature . Primary Identifier
Start End Strand
CDS:K07A12.6 8683220 8683512 -1
CDS:K07A12.6 8684014 8684126 -1
CDS:K07A12.6 8684382 8684453 -1
CDS:K07A12.6 8687026 8687090 -1

1 Sequence

Length
543

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:K07A12.6.1 K07A12.6.1 693   I: 8683197-8687217