WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K07A12.4a.1 Sequence Name  K07A12.4a.1
Length (nt)  2012   Chromosome Location  I: 8687634-8690937
Chromosome . Primary Identifier  I Chromosome Location . Start  8687634
Chromosome Location . End  8690937 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K07A12.4a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010622 hbs-1 K07A12.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K07A12.4a K07A12.4a 1833   I: 8687805-8687967

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K07A12.4a.1 8687634 8690937 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon22798   334   I: 8687634-8687967 Caenorhabditis elegans
Exon22801   110   I: 8688047-8688156 Caenorhabditis elegans
Exon22804   194   I: 8688205-8688398 Caenorhabditis elegans
Exon22807   106   I: 8688448-8688553 Caenorhabditis elegans
Exon22810   68   I: 8688596-8688663 Caenorhabditis elegans
Exon22813   219   I: 8688711-8688929 Caenorhabditis elegans
Exon22816   230   I: 8688986-8689215 Caenorhabditis elegans
Exon22819   110   I: 8689267-8689376 Caenorhabditis elegans
Exon22822   219   I: 8690075-8690293 Caenorhabditis elegans
Exon22826   311   I: 8690419-8690729 Caenorhabditis elegans
Exon22829   60   I: 8690778-8690837 Caenorhabditis elegans
Exon22834   51   I: 8690887-8690937 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K07A12.4a.1 8687634 8690937 -1

1 Sequence

Length
2012

1 Sequence Ontology Term

Identifier Name Description
transcript