WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K07A12.4a.2 Sequence Name  K07A12.4a.2
Length (nt)  2002   Chromosome Location  I: 8687636-8690929
Chromosome . Primary Identifier  I Chromosome Location . Start  8687636
Chromosome Location . End  8690929 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K07A12.4a.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010622 hbs-1 K07A12.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K07A12.4a K07A12.4a 1833   I: 8687805-8687967

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K07A12.4a.2 8687636 8690929 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon22800   332   I: 8687636-8687967 Caenorhabditis elegans
Exon22802   110   I: 8688047-8688156 Caenorhabditis elegans
Exon22805   194   I: 8688205-8688398 Caenorhabditis elegans
Exon22808   106   I: 8688448-8688553 Caenorhabditis elegans
Exon22811   68   I: 8688596-8688663 Caenorhabditis elegans
Exon22814   219   I: 8688711-8688929 Caenorhabditis elegans
Exon22817   230   I: 8688986-8689215 Caenorhabditis elegans
Exon22820   110   I: 8689267-8689376 Caenorhabditis elegans
Exon22823   219   I: 8690075-8690293 Caenorhabditis elegans
Exon22827   311   I: 8690419-8690729 Caenorhabditis elegans
Exon22830   60   I: 8690778-8690837 Caenorhabditis elegans
Exon22832   43   I: 8690887-8690929 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K07A12.4a.2 8687636 8690929 -1

1 Sequence

Length
2002

1 Sequence Ontology Term

Identifier Name Description
transcript