WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K07A12.5a.1 Sequence Name  K07A12.5a.1
Length (nt)  1150   Chromosome Location  I: 8693456-8695002
Chromosome . Primary Identifier  I Chromosome Location . Start  8693456
Chromosome Location . End  8695002 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K07A12.5a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010623 K07A12.5 K07A12.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K07A12.5a K07A12.5a 1113   I: 8693493-8693655

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K07A12.5a.1 8693456 8695002 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon22855   200   I: 8693456-8693655 Caenorhabditis elegans
Exon22859   303   I: 8693702-8694004 Caenorhabditis elegans
Exon22864   118   I: 8694053-8694170 Caenorhabditis elegans
Exon22870   95   I: 8694215-8694309 Caenorhabditis elegans
Exon22875   119   I: 8694356-8694474 Caenorhabditis elegans
Exon22879   138   I: 8694521-8694658 Caenorhabditis elegans
Exon22881   112   I: 8694774-8694885 Caenorhabditis elegans
Exon22883   65   I: 8694938-8695002 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K07A12.5a.1 8693456 8695002 -1

1 Sequence

Length
1150

1 Sequence Ontology Term

Identifier Name Description
transcript