WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F39H11.5.1 Sequence Name  F39H11.5.1
Length (nt)  878   Chromosome Location  I: 8695205-8696301
Chromosome . Primary Identifier  I Chromosome Location . Start  8695205
Chromosome Location . End  8696301 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F39H11.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003953 pbs-7 F39H11.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F39H11.5 F39H11.5 711   I: 8695363-8695644

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F39H11.5.1 8695205 8696301 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon22886   440   I: 8695205-8695644 Caenorhabditis elegans
Exon22887   112   I: 8695722-8695833 Caenorhabditis elegans
Exon22888   179   I: 8695879-8696057 Caenorhabditis elegans
Exon22889   106   I: 8696109-8696214 Caenorhabditis elegans
Exon22890   41   I: 8696261-8696301 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F39H11.5.1 8695205 8696301 -1

1 Sequence

Length
878

1 Sequence Ontology Term

Identifier Name Description
transcript