WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C36B1.1a.1 Sequence Name  C36B1.1a.1
Length (nt)  3734   Chromosome Location  I: 8705669-8724279
Chromosome . Primary Identifier  I Chromosome Location . Start  8705669
Chromosome Location . End  8724279 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C36B1.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000527 cle-1 C36B1.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C36B1.1a C36B1.1a 3417   I: 8705986-8706054

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C36B1.1a.1 8705669 8724279 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

21 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon22931   386   I: 8705669-8706054 Caenorhabditis elegans
Exon22934   104   I: 8706166-8706269 Caenorhabditis elegans
Exon22938   83   I: 8706319-8706401 Caenorhabditis elegans
Exon22942   305   I: 8707074-8707378 Caenorhabditis elegans
Exon22946   132   I: 8707428-8707559 Caenorhabditis elegans
Exon22950   191   I: 8708229-8708419 Caenorhabditis elegans
Exon22954   609   I: 8708795-8709403 Caenorhabditis elegans
Exon22959   133   I: 8709925-8710057 Caenorhabditis elegans
Exon22964   69   I: 8710541-8710609 Caenorhabditis elegans
Exon22968   87   I: 8713969-8714055 Caenorhabditis elegans
Exon22971   158   I: 8714304-8714461 Caenorhabditis elegans
Exon22974   74   I: 8714517-8714590 Caenorhabditis elegans
Exon22977   98   I: 8714641-8714738 Caenorhabditis elegans
Exon22980   110   I: 8714793-8714902 Caenorhabditis elegans
Exon22984   97   I: 8720519-8720615 Caenorhabditis elegans
Exon22986   140   I: 8720663-8720802 Caenorhabditis elegans
Exon22988   249   I: 8721377-8721625 Caenorhabditis elegans
Exon22990   170   I: 8721678-8721847 Caenorhabditis elegans
Exon22992   259   I: 8722178-8722436 Caenorhabditis elegans
Exon22995   195   I: 8722570-8722764 Caenorhabditis elegans
Exon22997   85   I: 8724195-8724279 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C36B1.1a.1 8705669 8724279 -1

1 Sequence

Length
3734

1 Sequence Ontology Term

Identifier Name Description
transcript