WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C36B1.1d.1 Sequence Name  C36B1.1d.1
Length (nt)  3528   Chromosome Location  I: 8705986-8724279
Chromosome . Primary Identifier  I Chromosome Location . Start  8705986
Chromosome Location . End  8724279 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C36B1.1d.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000527 cle-1 C36B1.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C36B1.1d C36B1.1d 3528   I: 8705986-8706054

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C36B1.1d.1 8705986 8724279 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

23 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon22933   69   I: 8705986-8706054 Caenorhabditis elegans
Exon22937   104   I: 8706166-8706269 Caenorhabditis elegans
Exon22941   83   I: 8706319-8706401 Caenorhabditis elegans
Exon22945   305   I: 8707074-8707378 Caenorhabditis elegans
Exon22949   132   I: 8707428-8707559 Caenorhabditis elegans
Exon22953   191   I: 8708229-8708419 Caenorhabditis elegans
Exon22957   609   I: 8708795-8709403 Caenorhabditis elegans
Exon22958   69   I: 8709763-8709831 Caenorhabditis elegans
Exon22962   133   I: 8709925-8710057 Caenorhabditis elegans
Exon22963   42   I: 8710272-8710313 Caenorhabditis elegans
Exon22966   69   I: 8710541-8710609 Caenorhabditis elegans
Exon22970   87   I: 8713969-8714055 Caenorhabditis elegans
Exon22973   158   I: 8714304-8714461 Caenorhabditis elegans
Exon22976   74   I: 8714517-8714590 Caenorhabditis elegans
Exon22979   98   I: 8714641-8714738 Caenorhabditis elegans
Exon22982   110   I: 8714793-8714902 Caenorhabditis elegans
Exon22985   97   I: 8720519-8720615 Caenorhabditis elegans
Exon22987   140   I: 8720663-8720802 Caenorhabditis elegans
Exon22989   249   I: 8721377-8721625 Caenorhabditis elegans
Exon22991   170   I: 8721678-8721847 Caenorhabditis elegans
Exon22993   259   I: 8722178-8722436 Caenorhabditis elegans
Exon22996   195   I: 8722570-8722764 Caenorhabditis elegans
Exon22998   85   I: 8724195-8724279 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C36B1.1d.1 8705986 8724279 -1

1 Sequence

Length
3528

1 Sequence Ontology Term

Identifier Name Description
transcript