WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

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mRNA :

WormMine ID  Transcript:C36B1.4.1 Sequence Name  C36B1.4.1
Length (nt)  883   Chromosome Location  I: 8727218-8728487
Chromosome . Primary Identifier  I Chromosome Location . Start  8727218
Chromosome Location . End  8728487 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C36B1.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003925 pas-4 C36B1.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C36B1.4 C36B1.4 762   I: 8727339-8727452

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C36B1.4.1 8727218 8728487 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon22999   235   I: 8727218-8727452 Caenorhabditis elegans
Exon23000   297   I: 8727533-8727829 Caenorhabditis elegans
Exon23001   252   I: 8727876-8728127 Caenorhabditis elegans
Exon23002   99   I: 8728389-8728487 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C36B1.4.1 8727218 8728487 -1

1 Sequence

Length
883

1 Sequence Ontology Term

Identifier Name Description
transcript