WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C36B1.8c.1 Sequence Name  C36B1.8c.1
Length (nt)  3095   Chromosome Location  I: 8737136-8741947
Chromosome . Primary Identifier  I Chromosome Location . Start  8737136
Chromosome Location . End  8741947 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C36B1.8c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007975 gls-1 C36B1.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C36B1.8c C36B1.8c 3027   I: 8737204-8737218

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C36B1.8c.1 8737136 8741947 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

18 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon23036   83   I: 8737136-8737218 Caenorhabditis elegans
Exon23039   151   I: 8737268-8737418 Caenorhabditis elegans
Exon23042   188   I: 8738121-8738308 Caenorhabditis elegans
Exon23045   77   I: 8738407-8738483 Caenorhabditis elegans
Exon23048   94   I: 8738536-8738629 Caenorhabditis elegans
Exon23051   330   I: 8738677-8739006 Caenorhabditis elegans
Exon23054   320   I: 8739104-8739423 Caenorhabditis elegans
Exon23057   194   I: 8739472-8739665 Caenorhabditis elegans
Exon23060   239   I: 8739751-8739989 Caenorhabditis elegans
Exon23063   109   I: 8740038-8740146 Caenorhabditis elegans
Exon23066   237   I: 8740192-8740428 Caenorhabditis elegans
Exon23069   116   I: 8740559-8740674 Caenorhabditis elegans
Exon23072   193   I: 8740718-8740910 Caenorhabditis elegans
Exon23075   164   I: 8740961-8741124 Caenorhabditis elegans
Exon23077   180   I: 8741189-8741368 Caenorhabditis elegans
Exon23081   82   I: 8741416-8741497 Caenorhabditis elegans
Exon23084   195   I: 8741549-8741743 Caenorhabditis elegans
Exon23085   143   I: 8741805-8741947 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C36B1.8c.1 8737136 8741947 1

1 Sequence

Length
3095

1 Sequence Ontology Term

Identifier Name Description
transcript