WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C36B1.12c.1 Sequence Name  C36B1.12c.1
Length (nt)  2328   Chromosome Location  I: 8752229-8755680
Chromosome . Primary Identifier  I Chromosome Location . Start  8752229
Chromosome Location . End  8755680 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C36B1.12c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007979 imp-1 C36B1.12 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C36B1.12c C36B1.12c 1989   I: 8752249-8752305

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C36B1.12c.1 8752229 8755680 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon23100   77   I: 8752229-8752305 Caenorhabditis elegans
Exon23108   378   I: 8752351-8752728 Caenorhabditis elegans
Exon23113   90   I: 8752900-8752989 Caenorhabditis elegans
Exon23118   90   I: 8753033-8753122 Caenorhabditis elegans
Exon23123   155   I: 8753166-8753320 Caenorhabditis elegans
Exon23128   179   I: 8753374-8753552 Caenorhabditis elegans
Exon23133   138   I: 8753600-8753737 Caenorhabditis elegans
Exon23138   359   I: 8753788-8754146 Caenorhabditis elegans
Exon23143   115   I: 8754377-8754491 Caenorhabditis elegans
Exon23148   290   I: 8754542-8754831 Caenorhabditis elegans
Exon23150   30   I: 8754964-8754993 Caenorhabditis elegans
Exon23156   427   I: 8755254-8755680 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C36B1.12c.1 8752229 8755680 1

1 Sequence

Length
2328

1 Sequence Ontology Term

Identifier Name Description
transcript