WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C36B1.12a.2 Sequence Name  C36B1.12a.2
Length (nt)  2211   Chromosome Location  I: 8752236-8755669
Chromosome . Primary Identifier  I Chromosome Location . Start  8752236
Chromosome Location . End  8755669 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C36B1.12a.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007979 imp-1 C36B1.12 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C36B1.12a C36B1.12a 1959   I: 8752249-8752305

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C36B1.12a.2 8752236 8755669 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon23101   70   I: 8752236-8752305 Caenorhabditis elegans
Exon23106   378   I: 8752351-8752728 Caenorhabditis elegans
Exon23111   90   I: 8752900-8752989 Caenorhabditis elegans
Exon23116   90   I: 8753033-8753122 Caenorhabditis elegans
Exon23121   155   I: 8753166-8753320 Caenorhabditis elegans
Exon23126   179   I: 8753374-8753552 Caenorhabditis elegans
Exon23131   138   I: 8753600-8753737 Caenorhabditis elegans
Exon23136   359   I: 8753788-8754146 Caenorhabditis elegans
Exon23141   115   I: 8754377-8754491 Caenorhabditis elegans
Exon23147   290   I: 8754542-8754831 Caenorhabditis elegans
Exon23153   202   I: 8755254-8755455 Caenorhabditis elegans
Exon23157   145   I: 8755525-8755669 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C36B1.12a.2 8752236 8755669 1

1 Sequence

Length
2211

1 Sequence Ontology Term

Identifier Name Description
transcript