WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C36B1.12b.1 Sequence Name  C36B1.12b.1
Length (nt)  2253   Chromosome Location  I: 8752236-8755678
Chromosome . Primary Identifier  I Chromosome Location . Start  8752236
Chromosome Location . End  8755678 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C36B1.12b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007979 imp-1 C36B1.12 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C36B1.12b C36B1.12b 1923   I: 8752249-8752305

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C36B1.12b.1 8752236 8755678 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon23103   70   I: 8752236-8752305 Caenorhabditis elegans
Exon23107   378   I: 8752351-8752728 Caenorhabditis elegans
Exon23112   90   I: 8752900-8752989 Caenorhabditis elegans
Exon23117   90   I: 8753033-8753122 Caenorhabditis elegans
Exon23122   155   I: 8753166-8753320 Caenorhabditis elegans
Exon23127   179   I: 8753374-8753552 Caenorhabditis elegans
Exon23132   138   I: 8753600-8753737 Caenorhabditis elegans
Exon23137   359   I: 8753788-8754146 Caenorhabditis elegans
Exon23142   115   I: 8754377-8754491 Caenorhabditis elegans
Exon23145   254   I: 8754542-8754795 Caenorhabditis elegans
Exon23155   425   I: 8755254-8755678 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C36B1.12b.1 8752236 8755678 1

1 Sequence

Length
2253

1 Sequence Ontology Term

Identifier Name Description
transcript