WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:DY3.2.1 Sequence Name  DY3.2.1
Length (nt)  2163   Chromosome Location  I: 8763041-8765631
Chromosome . Primary Identifier  I Chromosome Location . Start  8763041
Chromosome Location . End  8765631 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
DY3.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003052 lmn-1 DY3.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:DY3.2 DY3.2 1701   I: 8763056-8763153

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:DY3.2.1 8763041 8765631 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon23172   113   I: 8763041-8763153 Caenorhabditis elegans
Exon23173   85   I: 8763243-8763327 Caenorhabditis elegans
Exon23174   114   I: 8763376-8763489 Caenorhabditis elegans
Exon23175   234   I: 8763645-8763878 Caenorhabditis elegans
Exon23176   1041   I: 8763931-8764971 Caenorhabditis elegans
Exon23178   576   I: 8765056-8765631 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:DY3.2.1 8763041 8765631 1

1 Sequence

Length
2163

1 Sequence Ontology Term

Identifier Name Description
transcript