WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:DY3.3.1 Sequence Name  DY3.3.1
Length (nt)  704   Chromosome Location  I: 8766840-8768082
Chromosome . Primary Identifier  I Chromosome Location . Start  8766840
Chromosome Location . End  8768082 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
DY3.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001960 hlh-16 DY3.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:DY3.3 DY3.3 441   I: 8767027-8767134

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:DY3.3.1 8766840 8768082 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon23180   295   I: 8766840-8767134 Caenorhabditis elegans
Exon23181   225   I: 8767182-8767406 Caenorhabditis elegans
Exon23182   184   I: 8767899-8768082 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:DY3.3.1 8766840 8768082 -1

1 Sequence

Length
704

1 Sequence Ontology Term

Identifier Name Description
transcript