WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:DY3.5.1 Sequence Name  DY3.5.1
Length (nt)  2258   Chromosome Location  I: 8771178-8777518
Chromosome . Primary Identifier  I Chromosome Location . Start  8771178
Chromosome Location . End  8777518 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
DY3.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004115 pqn-26 DY3.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:DY3.5 DY3.5 1995   I: 8771434-8771549

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:DY3.5.1 8771178 8777518 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon23233   372   I: 8771178-8771549 Caenorhabditis elegans
Exon23234   94   I: 8772168-8772261 Caenorhabditis elegans
Exon23235   117   I: 8772308-8772424 Caenorhabditis elegans
Exon23236   117   I: 8772472-8772588 Caenorhabditis elegans
Exon23237   729   I: 8772974-8773702 Caenorhabditis elegans
Exon23238   81   I: 8774429-8774509 Caenorhabditis elegans
Exon23239   171   I: 8774588-8774758 Caenorhabditis elegans
Exon23240   425   I: 8775184-8775608 Caenorhabditis elegans
Exon23241   78   I: 8776711-8776788 Caenorhabditis elegans
Exon23242   74   I: 8777445-8777518 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:DY3.5.1 8771178 8777518 -1

1 Sequence

Length
2258

1 Sequence Ontology Term

Identifier Name Description
transcript