WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:DY3.7.2 Sequence Name  DY3.7.2
Length (nt)  3388   Chromosome Location  I: 8792964-8797295
Chromosome . Primary Identifier  I Chromosome Location . Start  8792964
Chromosome Location . End  8797295 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
DY3.7.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006324 sup-17 DY3.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:DY3.7 DY3.7 2769   I: 8793098-8793238

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:DY3.7.2 8792964 8797295 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon23255   275   I: 8792964-8793238 Caenorhabditis elegans
Exon23259   83   I: 8793290-8793372 Caenorhabditis elegans
Exon23261   125   I: 8793416-8793540 Caenorhabditis elegans
Exon23263   62   I: 8793585-8793646 Caenorhabditis elegans
Exon23265   131   I: 8793715-8793845 Caenorhabditis elegans
Exon23267   382   I: 8794134-8794515 Caenorhabditis elegans
Exon23269   69   I: 8794573-8794641 Caenorhabditis elegans
Exon23271   136   I: 8794691-8794826 Caenorhabditis elegans
Exon23273   192   I: 8794878-8795069 Caenorhabditis elegans
Exon23275   449   I: 8795146-8795594 Caenorhabditis elegans
Exon23277   220   I: 8795639-8795858 Caenorhabditis elegans
Exon23279   239   I: 8795906-8796144 Caenorhabditis elegans
Exon23281   156   I: 8796224-8796379 Caenorhabditis elegans
Exon23283   869   I: 8796427-8797295 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:DY3.7.2 8792964 8797295 1

1 Sequence

Length
3388

1 Sequence Ontology Term

Identifier Name Description
transcript