WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:DY3.7.1 Sequence Name  DY3.7.1
Length (nt)  3332   Chromosome Location  I: 8792965-8797288
Chromosome . Primary Identifier  I Chromosome Location . Start  8792965
Chromosome Location . End  8797288 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
DY3.7.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006324 sup-17 DY3.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:DY3.7 DY3.7 2769   I: 8793098-8793238

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:DY3.7.1 8792965 8797288 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

15 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon23256   73   I: 8792965-8793037 Caenorhabditis elegans
Exon23257   153   I: 8793086-8793238 Caenorhabditis elegans
Exon23258   83   I: 8793290-8793372 Caenorhabditis elegans
Exon23260   125   I: 8793416-8793540 Caenorhabditis elegans
Exon23262   62   I: 8793585-8793646 Caenorhabditis elegans
Exon23264   131   I: 8793715-8793845 Caenorhabditis elegans
Exon23266   382   I: 8794134-8794515 Caenorhabditis elegans
Exon23268   69   I: 8794573-8794641 Caenorhabditis elegans
Exon23270   136   I: 8794691-8794826 Caenorhabditis elegans
Exon23272   192   I: 8794878-8795069 Caenorhabditis elegans
Exon23274   449   I: 8795146-8795594 Caenorhabditis elegans
Exon23276   220   I: 8795639-8795858 Caenorhabditis elegans
Exon23278   239   I: 8795906-8796144 Caenorhabditis elegans
Exon23280   156   I: 8796224-8796379 Caenorhabditis elegans
Exon23282   862   I: 8796427-8797288 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:DY3.7.1 8792965 8797288 1

1 Sequence

Length
3332

1 Sequence Ontology Term

Identifier Name Description
transcript