WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F36A2.2.1 Sequence Name  F36A2.2.1
Length (nt)  1721   Chromosome Location  I: 8801612-8804697
Chromosome . Primary Identifier  I Chromosome Location . Start  8801612
Chromosome Location . End  8804697 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F36A2.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009452 F36A2.2 F36A2.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F36A2.2 F36A2.2 1584   I: 8801748-8801800

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F36A2.2.1 8801612 8804697 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon23305   189   I: 8801612-8801800 Caenorhabditis elegans
Exon23306   176   I: 8801850-8802025 Caenorhabditis elegans
Exon23307   101   I: 8802123-8802223 Caenorhabditis elegans
Exon23308   79   I: 8802271-8802349 Caenorhabditis elegans
Exon23309   159   I: 8802394-8802552 Caenorhabditis elegans
Exon23310   119   I: 8802605-8802723 Caenorhabditis elegans
Exon23311   93   I: 8802770-8802862 Caenorhabditis elegans
Exon23312   130   I: 8802907-8803036 Caenorhabditis elegans
Exon23313   275   I: 8803314-8803588 Caenorhabditis elegans
Exon23314   148   I: 8803639-8803786 Caenorhabditis elegans
Exon23315   173   I: 8803832-8804004 Caenorhabditis elegans
Exon23316   79   I: 8804619-8804697 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F36A2.2.1 8801612 8804697 -1

1 Sequence

Length
1721

1 Sequence Ontology Term

Identifier Name Description
transcript