WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F36A2.1a.1 Sequence Name  F36A2.1a.1
Length (nt)  2383   Chromosome Location  I: 8804799-8808048
Chromosome . Primary Identifier  I Chromosome Location . Start  8804799
Chromosome Location . End  8808048 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F36A2.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009451 cids-2 F36A2.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F36A2.1a F36A2.1a 1977   I: 8805132-8805204

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F36A2.1a.1 8804799 8808048 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon23317   406   I: 8804799-8805204 Caenorhabditis elegans
Exon23322   130   I: 8805456-8805585 Caenorhabditis elegans
Exon23327   144   I: 8805633-8805776 Caenorhabditis elegans
Exon23332   216   I: 8805830-8806045 Caenorhabditis elegans
Exon23337   102   I: 8806092-8806193 Caenorhabditis elegans
Exon23342   145   I: 8806240-8806384 Caenorhabditis elegans
Exon23347   299   I: 8806444-8806742 Caenorhabditis elegans
Exon23352   244   I: 8806797-8807040 Caenorhabditis elegans
Exon23357   147   I: 8807092-8807238 Caenorhabditis elegans
Exon23363   80   I: 8807290-8807369 Caenorhabditis elegans
Exon23367   104   I: 8807421-8807524 Caenorhabditis elegans
Exon23371   133   I: 8807575-8807707 Caenorhabditis elegans
Exon23376   115   I: 8807758-8807872 Caenorhabditis elegans
Exon23384   118   I: 8807931-8808048 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F36A2.1a.1 8804799 8808048 -1

1 Sequence

Length
2383

1 Sequence Ontology Term

Identifier Name Description
transcript