WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F36A2.1c.1 Sequence Name  F36A2.1c.1
Length (nt)  2385   Chromosome Location  I: 8804800-8808039
Chromosome . Primary Identifier  I Chromosome Location . Start  8804800
Chromosome Location . End  8808039 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F36A2.1c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009451 cids-2 F36A2.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F36A2.1c F36A2.1c 1989   I: 8805132-8805204

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F36A2.1c.1 8804800 8808039 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon23318   405   I: 8804800-8805204 Caenorhabditis elegans
Exon23324   130   I: 8805456-8805585 Caenorhabditis elegans
Exon23329   144   I: 8805633-8805776 Caenorhabditis elegans
Exon23334   216   I: 8805830-8806045 Caenorhabditis elegans
Exon23339   102   I: 8806092-8806193 Caenorhabditis elegans
Exon23344   145   I: 8806240-8806384 Caenorhabditis elegans
Exon23349   299   I: 8806444-8806742 Caenorhabditis elegans
Exon23354   244   I: 8806797-8807040 Caenorhabditis elegans
Exon23359   147   I: 8807092-8807238 Caenorhabditis elegans
Exon23364   92   I: 8807290-8807381 Caenorhabditis elegans
Exon23369   104   I: 8807421-8807524 Caenorhabditis elegans
Exon23373   133   I: 8807575-8807707 Caenorhabditis elegans
Exon23378   115   I: 8807758-8807872 Caenorhabditis elegans
Exon23383   109   I: 8807931-8808039 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F36A2.1c.1 8804800 8808039 -1

1 Sequence

Length
2385

1 Sequence Ontology Term

Identifier Name Description
transcript