WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F36A2.1d.1 Sequence Name  F36A2.1d.1
Length (nt)  2430   Chromosome Location  I: 8804803-8808081
Chromosome . Primary Identifier  I Chromosome Location . Start  8804803
Chromosome Location . End  8808081 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F36A2.1d.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009451 cids-2 F36A2.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F36A2.1d F36A2.1d 1995   I: 8805132-8805204

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F36A2.1d.1 8804803 8808081 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon23319   402   I: 8804803-8805204 Caenorhabditis elegans
Exon23325   130   I: 8805456-8805585 Caenorhabditis elegans
Exon23330   144   I: 8805633-8805776 Caenorhabditis elegans
Exon23335   216   I: 8805830-8806045 Caenorhabditis elegans
Exon23340   102   I: 8806092-8806193 Caenorhabditis elegans
Exon23345   145   I: 8806240-8806384 Caenorhabditis elegans
Exon23350   299   I: 8806444-8806742 Caenorhabditis elegans
Exon23355   244   I: 8806797-8807040 Caenorhabditis elegans
Exon23360   147   I: 8807092-8807238 Caenorhabditis elegans
Exon23365   92   I: 8807290-8807381 Caenorhabditis elegans
Exon23370   104   I: 8807421-8807524 Caenorhabditis elegans
Exon23374   133   I: 8807575-8807707 Caenorhabditis elegans
Exon23380   121   I: 8807758-8807878 Caenorhabditis elegans
Exon23385   151   I: 8807931-8808081 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F36A2.1d.1 8804803 8808081 -1

1 Sequence

Length
2430

1 Sequence Ontology Term

Identifier Name Description
transcript