WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F36A2.13.2 Sequence Name  F36A2.13.2
Length (nt)  9310   Chromosome Location  I: 8828010-8838704
Chromosome . Primary Identifier  I Chromosome Location . Start  8828010
Chromosome Location . End  8838704 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F36A2.13.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009460 ubr-5 F36A2.13 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F36A2.13 F36A2.13 8835   I: 8828418-8828633

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F36A2.13.2 8828010 8838704 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

29 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon23448   624   I: 8828010-8828633 Caenorhabditis elegans
Exon23451   129   I: 8828687-8828815 Caenorhabditis elegans
Exon23453   222   I: 8828866-8829087 Caenorhabditis elegans
Exon23455   565   I: 8829139-8829703 Caenorhabditis elegans
Exon23457   244   I: 8829757-8830000 Caenorhabditis elegans
Exon23459   784   I: 8830057-8830840 Caenorhabditis elegans
Exon23461   315   I: 8830886-8831200 Caenorhabditis elegans
Exon23463   309   I: 8831253-8831561 Caenorhabditis elegans
Exon23465   429   I: 8831609-8832037 Caenorhabditis elegans
Exon23467   122   I: 8832107-8832228 Caenorhabditis elegans
Exon23469   673   I: 8832274-8832946 Caenorhabditis elegans
Exon23471   697   I: 8832997-8833693 Caenorhabditis elegans
Exon23473   148   I: 8833737-8833884 Caenorhabditis elegans
Exon23475   172   I: 8833932-8834103 Caenorhabditis elegans
Exon23477   464   I: 8834149-8834612 Caenorhabditis elegans
Exon23479   564   I: 8834657-8835220 Caenorhabditis elegans
Exon23481   160   I: 8835268-8835427 Caenorhabditis elegans
Exon23483   159   I: 8835470-8835628 Caenorhabditis elegans
Exon23485   351   I: 8835678-8836028 Caenorhabditis elegans
Exon23487   429   I: 8836077-8836505 Caenorhabditis elegans
Exon23489   229   I: 8836556-8836784 Caenorhabditis elegans
Exon23491   423   I: 8836844-8837266 Caenorhabditis elegans
Exon23493   205   I: 8837313-8837517 Caenorhabditis elegans
Exon23495   126   I: 8837571-8837696 Caenorhabditis elegans
Exon23497   109   I: 8837742-8837850 Caenorhabditis elegans
Exon23499   109   I: 8837899-8838007 Caenorhabditis elegans
Exon23501   351   I: 8838054-8838404 Caenorhabditis elegans
Exon23503   139   I: 8838463-8838601 Caenorhabditis elegans
Exon23504   59   I: 8838646-8838704 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F36A2.13.2 8828010 8838704 -1

1 Sequence

Length
9310

1 Sequence Ontology Term

Identifier Name Description
transcript