WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F36A2.13.1 Sequence Name  F36A2.13.1
Length (nt)  9286   Chromosome Location  I: 8828048-8838719
Chromosome . Primary Identifier  I Chromosome Location . Start  8828048
Chromosome Location . End  8838719 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F36A2.13.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009460 ubr-5 F36A2.13 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F36A2.13 F36A2.13 8835   I: 8828418-8828633

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F36A2.13.1 8828048 8838719 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

29 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon23449   586   I: 8828048-8828633 Caenorhabditis elegans
Exon23450   129   I: 8828687-8828815 Caenorhabditis elegans
Exon23452   222   I: 8828866-8829087 Caenorhabditis elegans
Exon23454   565   I: 8829139-8829703 Caenorhabditis elegans
Exon23456   244   I: 8829757-8830000 Caenorhabditis elegans
Exon23458   784   I: 8830057-8830840 Caenorhabditis elegans
Exon23460   315   I: 8830886-8831200 Caenorhabditis elegans
Exon23462   309   I: 8831253-8831561 Caenorhabditis elegans
Exon23464   429   I: 8831609-8832037 Caenorhabditis elegans
Exon23466   122   I: 8832107-8832228 Caenorhabditis elegans
Exon23468   673   I: 8832274-8832946 Caenorhabditis elegans
Exon23470   697   I: 8832997-8833693 Caenorhabditis elegans
Exon23472   148   I: 8833737-8833884 Caenorhabditis elegans
Exon23474   172   I: 8833932-8834103 Caenorhabditis elegans
Exon23476   464   I: 8834149-8834612 Caenorhabditis elegans
Exon23478   564   I: 8834657-8835220 Caenorhabditis elegans
Exon23480   160   I: 8835268-8835427 Caenorhabditis elegans
Exon23482   159   I: 8835470-8835628 Caenorhabditis elegans
Exon23484   351   I: 8835678-8836028 Caenorhabditis elegans
Exon23486   429   I: 8836077-8836505 Caenorhabditis elegans
Exon23488   229   I: 8836556-8836784 Caenorhabditis elegans
Exon23490   423   I: 8836844-8837266 Caenorhabditis elegans
Exon23492   205   I: 8837313-8837517 Caenorhabditis elegans
Exon23494   126   I: 8837571-8837696 Caenorhabditis elegans
Exon23496   109   I: 8837742-8837850 Caenorhabditis elegans
Exon23498   109   I: 8837899-8838007 Caenorhabditis elegans
Exon23500   351   I: 8838054-8838404 Caenorhabditis elegans
Exon23502   139   I: 8838463-8838601 Caenorhabditis elegans
Exon23505   73   I: 8838647-8838719 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F36A2.13.1 8828048 8838719 -1

1 Sequence

Length
9286

1 Sequence Ontology Term

Identifier Name Description
transcript