WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F55H12.3.1 Sequence Name  F55H12.3.1
Length (nt)  9289   Chromosome Location  I: 8876319-8893317
Chromosome . Primary Identifier  I Chromosome Location . Start  8876319
Chromosome Location . End  8893317 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F55H12.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010134 F55H12.3 F55H12.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F55H12.3 F55H12.3 8874   I: 8876372-8876489

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F55H12.3.1 8876319 8893317 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

52 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon23601   171   I: 8876319-8876489 Caenorhabditis elegans
Exon23602   85   I: 8877049-8877133 Caenorhabditis elegans
Exon23603   226   I: 8877223-8877448 Caenorhabditis elegans
Exon23604   426   I: 8878089-8878514 Caenorhabditis elegans
Exon23605   187   I: 8879545-8879731 Caenorhabditis elegans
Exon23606   512   I: 8879776-8880287 Caenorhabditis elegans
Exon23607   238   I: 8880395-8880632 Caenorhabditis elegans
Exon23608   509   I: 8880983-8881491 Caenorhabditis elegans
Exon23609   130   I: 8881576-8881705 Caenorhabditis elegans
Exon23610   120   I: 8881782-8881901 Caenorhabditis elegans
Exon23611   180   I: 8882050-8882229 Caenorhabditis elegans
Exon23612   82   I: 8882772-8882853 Caenorhabditis elegans
Exon23613   242   I: 8882938-8883179 Caenorhabditis elegans
Exon23614   60   I: 8883247-8883306 Caenorhabditis elegans
Exon23615   180   I: 8883365-8883544 Caenorhabditis elegans
Exon23616   269   I: 8883834-8884102 Caenorhabditis elegans
Exon23617   419   I: 8884191-8884609 Caenorhabditis elegans
Exon23618   86   I: 8884664-8884749 Caenorhabditis elegans
Exon23619   117   I: 8884795-8884911 Caenorhabditis elegans
Exon23620   135   I: 8884991-8885125 Caenorhabditis elegans
Exon23621   80   I: 8885193-8885272 Caenorhabditis elegans
Exon23622   187   I: 8885331-8885517 Caenorhabditis elegans
Exon23623   163   I: 8885807-8885969 Caenorhabditis elegans
Exon23624   112   I: 8886095-8886206 Caenorhabditis elegans
Exon23625   112   I: 8886381-8886492 Caenorhabditis elegans
Exon23626   115   I: 8886549-8886663 Caenorhabditis elegans
Exon23627   134   I: 8886826-8886959 Caenorhabditis elegans
Exon23628   152   I: 8887005-8887156 Caenorhabditis elegans
Exon23629   108   I: 8887466-8887573 Caenorhabditis elegans
Exon23630   114   I: 8887623-8887736 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F55H12.3.1 8876319 8893317 1

1 Sequence

Length
9289

1 Sequence Ontology Term

Identifier Name Description
transcript