WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T08G11.5.1 Sequence Name  T08G11.5.1
Length (nt)  1613   Chromosome Location  I: 8897632-8901435
Chromosome . Primary Identifier  I Chromosome Location . Start  8897632
Chromosome Location . End  8901435 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T08G11.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006765 unc-29 T08G11.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T08G11.5 T08G11.5 1482   I: 8897756-8897823

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T08G11.5.1 8897632 8901435 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon23655   192   I: 8897632-8897823 Caenorhabditis elegans
Exon23656   121   I: 8897874-8897994 Caenorhabditis elegans
Exon23657   282   I: 8898416-8898697 Caenorhabditis elegans
Exon23658   236   I: 8898751-8898986 Caenorhabditis elegans
Exon23659   244   I: 8899087-8899330 Caenorhabditis elegans
Exon23660   59   I: 8899381-8899439 Caenorhabditis elegans
Exon23661   107   I: 8899980-8900086 Caenorhabditis elegans
Exon23662   110   I: 8900128-8900237 Caenorhabditis elegans
Exon23663   45   I: 8900287-8900331 Caenorhabditis elegans
Exon23664   72   I: 8900399-8900470 Caenorhabditis elegans
Exon23665   62   I: 8900571-8900632 Caenorhabditis elegans
Exon23666   83   I: 8901353-8901435 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T08G11.5.1 8897632 8901435 -1

1 Sequence

Length
1613

1 Sequence Ontology Term

Identifier Name Description
transcript