WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:T08G11.4a Sequence Name  T08G11.4a
Length (nt)  1701   Chromosome Location  I: 8902848-8902985
Chromosome . Primary Identifier  I Chromosome Location . Start  8902848
Chromosome Location . End  8902985
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T08G11.4a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE23958 TGS-1, isoform a 65.4 566 Caenorhabditis elegans
 

Other

9 RNAi

WormBase ID
WBRNAi00052882
WBRNAi00026240
WBRNAi00026241
WBRNAi00081315
WBRNAi00000097
WBRNAi00116748
WBRNAi00064431
WBRNAi00069316
WBRNAi00069315

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:T08G11.4a 8902848 8902985 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011631 tgs-1 T08G11.4 Caenorhabditis elegans

8 Locations


Feature . Primary Identifier
Start End Strand
CDS:T08G11.4a 8902848 8902985 -1
CDS:T08G11.4a 8903062 8903381 -1
CDS:T08G11.4a 8903514 8903911 -1
CDS:T08G11.4a 8903954 8904093 -1
CDS:T08G11.4a 8904314 8904487 -1
CDS:T08G11.4a 8904535 8904809 -1
CDS:T08G11.4a 8904864 8904979 -1
CDS:T08G11.4a 8905308 8905447 -1

1 Sequence

Length
1701

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:T08G11.4a.1 T08G11.4a.1 1808   I: 8902741-8905447