WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F53B6.2c Sequence Name  F53B6.2c
Length (nt)  3132   Chromosome Location  I: 8931163-8931232
Chromosome . Primary Identifier  I Chromosome Location . Start  8931163
Chromosome Location . End  8931232
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F53B6.2c

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE32428 MADD-4, isoform c 115.8 1043 Caenorhabditis elegans
 

Other

5 RNAi

WormBase ID
WBRNAi00001160
WBRNAi00001823
WBRNAi00048088
WBRNAi00003744
WBRNAi00032675

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F53B6.2c 8931163 8931232 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009958 madd-4 F53B6.2 Caenorhabditis elegans

16 Locations


Feature . Primary Identifier
Start End Strand
CDS:F53B6.2c 8931163 8931232 -1
CDS:F53B6.2c 8931386 8931440 -1
CDS:F53B6.2c 8931964 8932188 -1
CDS:F53B6.2c 8932261 8932555 -1
CDS:F53B6.2c 8932784 8933041 -1
CDS:F53B6.2c 8933097 8933597 -1
CDS:F53B6.2c 8933711 8934180 -1
CDS:F53B6.2c 8934439 8934569 -1
CDS:F53B6.2c 8934997 8935077 -1
CDS:F53B6.2c 8939469 8939668 -1
CDS:F53B6.2c 8940139 8940277 -1
CDS:F53B6.2c 8940824 8941025 -1
CDS:F53B6.2c 8941076 8941187 -1
CDS:F53B6.2c 8941234 8941350 -1
CDS:F53B6.2c 8941887 8942048 -1
CDS:F53B6.2c 8942091 8942204 -1

1 Sequence

Length
3132

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F53B6.2c.1 F53B6.2c.1 3341   I: 8931042-8942292