WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F32H2.1a.1 Sequence Name  F32H2.1a.1
Length (nt)  2863   Chromosome Location  I: 8962322-8965923
Chromosome . Primary Identifier  I Chromosome Location . Start  8962322
Chromosome Location . End  8965923 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F32H2.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001568 snpc-4 F32H2.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F32H2.1a F32H2.1a 2835   I: 8962350-8962427

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F32H2.1a.1 8962322 8965923 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon23841   106   I: 8962322-8962427 Caenorhabditis elegans
Exon23843   600   I: 8962477-8963076 Caenorhabditis elegans
Exon23845   227   I: 8963149-8963375 Caenorhabditis elegans
Exon23847   190   I: 8963421-8963610 Caenorhabditis elegans
Exon23849   285   I: 8963731-8964015 Caenorhabditis elegans
Exon23851   213   I: 8964094-8964306 Caenorhabditis elegans
Exon23853   155   I: 8964376-8964530 Caenorhabditis elegans
Exon23855   70   I: 8964586-8964655 Caenorhabditis elegans
Exon23857   225   I: 8964700-8964924 Caenorhabditis elegans
Exon23859   321   I: 8964982-8965302 Caenorhabditis elegans
Exon23861   210   I: 8965351-8965560 Caenorhabditis elegans
Exon23864   138   I: 8965609-8965746 Caenorhabditis elegans
Exon23865   123   I: 8965801-8965923 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F32H2.1a.1 8962322 8965923 1

1 Sequence

Length
2863

1 Sequence Ontology Term

Identifier Name Description
transcript