WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F36F2.6.1 Sequence Name  F36F2.6.1
Length (nt)  2469   Chromosome Location  I: 9004513-9008708
Chromosome . Primary Identifier  I Chromosome Location . Start  9004513
Chromosome Location . End  9008708 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F36F2.6.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009479 fcp-1 F36F2.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F36F2.6 F36F2.6 1980   I: 9005002-9005157

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F36F2.6.1 9004513 9008708 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon23956   645   I: 9004513-9005157 Caenorhabditis elegans
Exon23957   129   I: 9005426-9005554 Caenorhabditis elegans
Exon23958   472   I: 9005599-9006070 Caenorhabditis elegans
Exon23959   188   I: 9006115-9006302 Caenorhabditis elegans
Exon23960   288   I: 9006392-9006679 Caenorhabditis elegans
Exon23961   243   I: 9007095-9007337 Caenorhabditis elegans
Exon23962   129   I: 9007809-9007937 Caenorhabditis elegans
Exon23963   177   I: 9008289-9008465 Caenorhabditis elegans
Exon23964   198   I: 9008511-9008708 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F36F2.6.1 9004513 9008708 -1

1 Sequence

Length
2469

1 Sequence Ontology Term

Identifier Name Description
transcript