WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:W06D4.2.1 Sequence Name  W06D4.2.1
Length (nt)  1007   Chromosome Location  I: 9056293-9057824
Chromosome . Primary Identifier  I Chromosome Location . Start  9056293
Chromosome Location . End  9057824 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W06D4.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012296 spe-46 W06D4.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:W06D4.2 W06D4.2 873   I: 9056419-9056518

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:W06D4.2.1 9056293 9057824 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon24085   26   I: 9056293-9056318 Caenorhabditis elegans
Exon24087   151   I: 9056368-9056518 Caenorhabditis elegans
Exon24088   164   I: 9056602-9056765 Caenorhabditis elegans
Exon24090   391   I: 9056813-9057203 Caenorhabditis elegans
Exon24092   83   I: 9057458-9057540 Caenorhabditis elegans
Exon24094   84   I: 9057585-9057668 Caenorhabditis elegans
Exon24096   108   I: 9057717-9057824 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:W06D4.2.1 9056293 9057824 1

1 Sequence

Length
1007

1 Sequence Ontology Term

Identifier Name Description
transcript