WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T06D10.1.1 Sequence Name  T06D10.1.1
Length (nt)  1138   Chromosome Location  I: 9070850-9075077
Chromosome . Primary Identifier  I Chromosome Location . Start  9070850
Chromosome Location . End  9075077 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T06D10.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011531 rsbp-1 T06D10.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T06D10.1 T06D10.1 516   I: 9071678-9071761

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T06D10.1.1 9070850 9075077 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon24139   55   I: 9070850-9070904 Caenorhabditis elegans
Exon24140   198   I: 9071564-9071761 Caenorhabditis elegans
Exon24142   218   I: 9072455-9072672 Caenorhabditis elegans
Exon24145   83   I: 9073141-9073223 Caenorhabditis elegans
Exon24148   89   I: 9073307-9073395 Caenorhabditis elegans
Exon24153   495   I: 9074583-9075077 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T06D10.1.1 9070850 9075077 -1

1 Sequence

Length
1138

1 Sequence Ontology Term

Identifier Name Description
transcript