WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00303078 Gene Name  T06D10.8
Sequence Name  ? T06D10.8 Organism  Caenorhabditis elegans
Biotype  SO:0001217 Genetic Position  I:±
Length (nt)  ? 198
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
WBGene00303078

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:T06D10.8.1 T06D10.8.1 198   I: 9074872-9075069
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T06D10.8 T06D10.8 198   I: 9074872-9075069

0 RNAi Result

8 Allele

Public Name
gk962858
gk962706
gk963902
gk963849
gk964316
WBVar00538261
WBVar00099922
gk118033

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
WBGene00303078 9074872 9075069 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

0 Downstream Intergenic Region

2 Expression Clusters

Regulated By Treatment Description Algorithm Primary Identifier
  Transcripts that showed significantly decreased expression in scc-1(ubs19) comparing to in control animals. DESeq2 v.1.34, fold change > 2, FDR < 0.05. WBPaper00067078:scc-1(ubs19)_downregulated
  Transcripts that showed significantly decreased expression in dpy-26(ubs4) comparing to in control animals. DESeq2 v.1.34, fold change > 2, FDR < 0.05. WBPaper00067078:dpy-26(ubs4)_downregulated

0 Expression Patterns

0 GO Annotation

0 Homologues

1 Locations


Feature . Primary Identifier
Start End Strand
WBGene00303078 9074872 9075069 -1

0 Ontology Annotations

0 Regulates Expr Cluster

1 Sequence

Length
198

1 Sequence Ontology Term