WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:W10D5.3f.1 Sequence Name  W10D5.3f.1
Length (nt)  2778   Chromosome Location  I: 9101323-9107848
Chromosome . Primary Identifier  I Chromosome Location . Start  9101323
Chromosome Location . End  9107848 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W10D5.3f.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001574 gei-17 W10D5.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:W10D5.3f W10D5.3f 2262   I: 9101530-9101672

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:W10D5.3f.1 9101323 9107848 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon24185   350   I: 9101323-9101672 Caenorhabditis elegans
Exon24195   166   I: 9101838-9102003 Caenorhabditis elegans
Exon24202   138   I: 9102265-9102402 Caenorhabditis elegans
Exon24210   257   I: 9102641-9102897 Caenorhabditis elegans
Exon24219   314   I: 9102999-9103312 Caenorhabditis elegans
Exon24230   473   I: 9104049-9104521 Caenorhabditis elegans
Exon24240   97   I: 9104606-9104702 Caenorhabditis elegans
Exon24250   95   I: 9104748-9104842 Caenorhabditis elegans
Exon24260   126   I: 9104899-9105024 Caenorhabditis elegans
Exon24270   201   I: 9105860-9106060 Caenorhabditis elegans
Exon24282   30   I: 9107002-9107031 Caenorhabditis elegans
Exon24291   114   I: 9107111-9107224 Caenorhabditis elegans
Exon24301   36   I: 9107307-9107342 Caenorhabditis elegans
Exon24312   381   I: 9107468-9107848 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:W10D5.3f.1 9101323 9107848 -1

1 Sequence

Length
2778

1 Sequence Ontology Term

Identifier Name Description
transcript