WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZK858.5.1 Sequence Name  ZK858.5.1
Length (nt)  1322   Chromosome Location  I: 9135764-9138365
Chromosome . Primary Identifier  I Chromosome Location . Start  9135764
Chromosome Location . End  9138365 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZK858.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00014118 ZK858.5 ZK858.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZK858.5 ZK858.5 1230   I: 9135847-9135996

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZK858.5.1 9135764 9138365 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon24359   233   I: 9135764-9135996 Caenorhabditis elegans
Exon24360   117   I: 9136058-9136174 Caenorhabditis elegans
Exon24361   163   I: 9136221-9136383 Caenorhabditis elegans
Exon24362   92   I: 9136622-9136713 Caenorhabditis elegans
Exon24363   75   I: 9136763-9136837 Caenorhabditis elegans
Exon24364   120   I: 9136899-9137018 Caenorhabditis elegans
Exon24365   86   I: 9137261-9137346 Caenorhabditis elegans
Exon24366   185   I: 9137399-9137583 Caenorhabditis elegans
Exon24367   97   I: 9137646-9137742 Caenorhabditis elegans
Exon24368   104   I: 9138169-9138272 Caenorhabditis elegans
Exon24369   50   I: 9138316-9138365 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZK858.5.1 9135764 9138365 -1

1 Sequence

Length
1322

1 Sequence Ontology Term

Identifier Name Description
transcript