WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZK858.6b.1 Sequence Name  ZK858.6b.1
Length (nt)  2268   Chromosome Location  I: 9138407-9141523
Chromosome . Primary Identifier  I Chromosome Location . Start  9138407
Chromosome Location . End  9141523 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZK858.6b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00014119 ZK858.6 ZK858.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZK858.6b ZK858.6b 1860   I: 9138812-9138914

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZK858.6b.1 9138407 9141523 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon24371   508   I: 9138407-9138914 Caenorhabditis elegans
Exon24373   82   I: 9138963-9139044 Caenorhabditis elegans
Exon24376   175   I: 9139371-9139545 Caenorhabditis elegans
Exon24378   482   I: 9139592-9140073 Caenorhabditis elegans
Exon24380   204   I: 9140125-9140328 Caenorhabditis elegans
Exon24382   260   I: 9140504-9140763 Caenorhabditis elegans
Exon24384   171   I: 9140822-9140992 Caenorhabditis elegans
Exon24386   260   I: 9141046-9141305 Caenorhabditis elegans
Exon24388   126   I: 9141398-9141523 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZK858.6b.1 9138407 9141523 -1

1 Sequence

Length
2268

1 Sequence Ontology Term

Identifier Name Description
transcript