WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:H32K16.1.1 Sequence Name  H32K16.1.1
Length (nt)  1667   Chromosome Location  I: 9149673-9153252
Chromosome . Primary Identifier  I Chromosome Location . Start  9149673
Chromosome Location . End  9153252 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
H32K16.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010421 slc-36.4 H32K16.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:H32K16.1 H32K16.1 1446   I: 9149717-9149907

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:H32K16.1.1 9149673 9153252 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon24398   235   I: 9149673-9149907 Caenorhabditis elegans
Exon24399   91   I: 9150407-9150497 Caenorhabditis elegans
Exon24400   89   I: 9150547-9150635 Caenorhabditis elegans
Exon24401   93   I: 9150684-9150776 Caenorhabditis elegans
Exon24402   85   I: 9150826-9150910 Caenorhabditis elegans
Exon24403   171   I: 9151238-9151408 Caenorhabditis elegans
Exon24404   290   I: 9151818-9152107 Caenorhabditis elegans
Exon24406   179   I: 9152527-9152705 Caenorhabditis elegans
Exon24407   142   I: 9152749-9152890 Caenorhabditis elegans
Exon24408   292   I: 9152961-9153252 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:H32K16.1.1 9149673 9153252 1

1 Sequence

Length
1667

1 Sequence Ontology Term

Identifier Name Description
transcript