WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F25H5.3d.1 Sequence Name  F25H5.3d.1
Length (nt)  2077   Chromosome Location  I: 9168432-9177485
Chromosome . Primary Identifier  I Chromosome Location . Start  9168432
Chromosome Location . End  9177485 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F25H5.3d.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009126 pyk-1 F25H5.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F25H5.3d F25H5.3d 1677   I: 9168463-9168477

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F25H5.3d.1 9168432 9177485 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon24449   46   I: 9168432-9168477 Caenorhabditis elegans
Exon24452   116   I: 9171477-9171592 Caenorhabditis elegans
Exon24463   208   I: 9174995-9175202 Caenorhabditis elegans
Exon24469   675   I: 9175280-9175954 Caenorhabditis elegans
Exon24475   120   I: 9176002-9176121 Caenorhabditis elegans
Exon24482   499   I: 9176517-9177015 Caenorhabditis elegans
Exon24487   413   I: 9177073-9177485 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F25H5.3d.1 9168432 9177485 1

1 Sequence

Length
2077

1 Sequence Ontology Term

Identifier Name Description
transcript