WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F36H2.1b.1 Sequence Name  F36H2.1b.1
Length (nt)  3708   Chromosome Location  I: 9234174-9245924
Chromosome . Primary Identifier  I Chromosome Location . Start  9234174
Chromosome Location . End  9245924 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F36H2.1b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009498 tat-5 F36H2.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F36H2.1b F36H2.1b 3171   I: 9234678-9234866

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F36H2.1b.1 9234174 9245924 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon24619   693   I: 9234174-9234866 Caenorhabditis elegans
Exon24622   149   I: 9235674-9235822 Caenorhabditis elegans
Exon24626   257   I: 9235869-9236125 Caenorhabditis elegans
Exon24630   575   I: 9236911-9237485 Caenorhabditis elegans
Exon24634   598   I: 9237965-9238562 Caenorhabditis elegans
Exon24638   337   I: 9238910-9239246 Caenorhabditis elegans
Exon24642   247   I: 9239689-9239935 Caenorhabditis elegans
Exon24646   510   I: 9239990-9240499 Caenorhabditis elegans
Exon24649   151   I: 9240900-9241050 Caenorhabditis elegans
Exon24655   80   I: 9245688-9245767 Caenorhabditis elegans
Exon24657   111   I: 9245814-9245924 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F36H2.1b.1 9234174 9245924 -1

1 Sequence

Length
3708

1 Sequence Ontology Term

Identifier Name Description
transcript