WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F36H2.3h.1 Sequence Name  F36H2.3h.1
Length (nt)  5588   Chromosome Location  I: 9251838-9261640
Chromosome . Primary Identifier  I Chromosome Location . Start  9251838
Chromosome Location . End  9261640 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F36H2.3h.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009500 cfh-1 F36H2.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F36H2.3h F36H2.3h 5352   I: 9252074-9252445

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F36H2.3h.1 9251838 9261640 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

24 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon24685   608   I: 9251838-9252445 Caenorhabditis elegans
Exon24692   501   I: 9252517-9253017 Caenorhabditis elegans
Exon24697   68   I: 9253067-9253134 Caenorhabditis elegans
Exon24701   124   I: 9253410-9253533 Caenorhabditis elegans
Exon24705   95   I: 9253578-9253672 Caenorhabditis elegans
Exon24707   201   I: 9254251-9254451 Caenorhabditis elegans
Exon24724   123   I: 9255037-9255159 Caenorhabditis elegans
Exon24735   495   I: 9255272-9255766 Caenorhabditis elegans
Exon24746   276   I: 9255853-9256128 Caenorhabditis elegans
Exon24757   274   I: 9256178-9256451 Caenorhabditis elegans
Exon24765   210   I: 9256520-9256729 Caenorhabditis elegans
Exon24774   213   I: 9256922-9257134 Caenorhabditis elegans
Exon24781   210   I: 9257425-9257634 Caenorhabditis elegans
Exon24789   213   I: 9257891-9258103 Caenorhabditis elegans
Exon24797   210   I: 9258239-9258448 Caenorhabditis elegans
Exon24808   215   I: 9258782-9258996 Caenorhabditis elegans
Exon24819   93   I: 9259048-9259140 Caenorhabditis elegans
Exon24830   187   I: 9259200-9259386 Caenorhabditis elegans
Exon24840   24   I: 9259778-9259801 Caenorhabditis elegans
Exon24851   174   I: 9259864-9260037 Caenorhabditis elegans
Exon24862   305   I: 9260083-9260387 Caenorhabditis elegans
Exon24873   321   I: 9260777-9261097 Caenorhabditis elegans
Exon24884   351   I: 9261148-9261498 Caenorhabditis elegans
Exon24893   97   I: 9261544-9261640 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F36H2.3h.1 9251838 9261640 -1

1 Sequence

Length
5588

1 Sequence Ontology Term

Identifier Name Description
transcript