WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F36H2.3a.1 Sequence Name  F36H2.3a.1
Length (nt)  5946   Chromosome Location  I: 9251872-9261657
Chromosome . Primary Identifier  I Chromosome Location . Start  9251872
Chromosome Location . End  9261657 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F36H2.3a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009500 cfh-1 F36H2.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F36H2.3a F36H2.3a 4173   I: 9254645-9254850

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F36H2.3a.1 9251872 9261657 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

23 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon24688   574   I: 9251872-9252445 Caenorhabditis elegans
Exon24690   501   I: 9252517-9253017 Caenorhabditis elegans
Exon24695   68   I: 9253067-9253134 Caenorhabditis elegans
Exon24700   124   I: 9253410-9253533 Caenorhabditis elegans
Exon24704   95   I: 9253578-9253672 Caenorhabditis elegans
Exon24709   600   I: 9254251-9254850 Caenorhabditis elegans
Exon24717   123   I: 9255037-9255159 Caenorhabditis elegans
Exon24728   495   I: 9255272-9255766 Caenorhabditis elegans
Exon24739   276   I: 9255853-9256128 Caenorhabditis elegans
Exon24750   274   I: 9256178-9256451 Caenorhabditis elegans
Exon24761   210   I: 9256520-9256729 Caenorhabditis elegans
Exon24769   213   I: 9256922-9257134 Caenorhabditis elegans
Exon24778   210   I: 9257425-9257634 Caenorhabditis elegans
Exon24785   213   I: 9257891-9258103 Caenorhabditis elegans
Exon24793   210   I: 9258239-9258448 Caenorhabditis elegans
Exon24801   215   I: 9258782-9258996 Caenorhabditis elegans
Exon24812   93   I: 9259048-9259140 Caenorhabditis elegans
Exon24823   187   I: 9259200-9259386 Caenorhabditis elegans
Exon24844   174   I: 9259864-9260037 Caenorhabditis elegans
Exon24855   305   I: 9260083-9260387 Caenorhabditis elegans
Exon24866   321   I: 9260777-9261097 Caenorhabditis elegans
Exon24877   351   I: 9261148-9261498 Caenorhabditis elegans
Exon24897   114   I: 9261544-9261657 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F36H2.3a.1 9251872 9261657 -1

1 Sequence

Length
5946

1 Sequence Ontology Term

Identifier Name Description
transcript