WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F36H2.3k.1 Sequence Name  F36H2.3k.1
Length (nt)  5325   Chromosome Location  I: 9252074-9261640
Chromosome . Primary Identifier  I Chromosome Location . Start  9252074
Chromosome Location . End  9261640 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F36H2.3k.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009500 cfh-1 F36H2.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F36H2.3k F36H2.3k 5325   I: 9252074-9252445

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F36H2.3k.1 9252074 9261640 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

24 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon24689   372   I: 9252074-9252445 Caenorhabditis elegans
Exon24694   501   I: 9252517-9253017 Caenorhabditis elegans
Exon24699   68   I: 9253067-9253134 Caenorhabditis elegans
Exon24702   124   I: 9253410-9253533 Caenorhabditis elegans
Exon24706   95   I: 9253578-9253672 Caenorhabditis elegans
Exon24708   201   I: 9254251-9254451 Caenorhabditis elegans
Exon24727   123   I: 9255037-9255159 Caenorhabditis elegans
Exon24738   495   I: 9255272-9255766 Caenorhabditis elegans
Exon24749   276   I: 9255853-9256128 Caenorhabditis elegans
Exon24760   274   I: 9256178-9256451 Caenorhabditis elegans
Exon24768   210   I: 9256520-9256729 Caenorhabditis elegans
Exon24777   213   I: 9256922-9257134 Caenorhabditis elegans
Exon24784   210   I: 9257425-9257634 Caenorhabditis elegans
Exon24792   213   I: 9257891-9258103 Caenorhabditis elegans
Exon24800   210   I: 9258239-9258448 Caenorhabditis elegans
Exon24811   215   I: 9258782-9258996 Caenorhabditis elegans
Exon24822   93   I: 9259048-9259140 Caenorhabditis elegans
Exon24833   187   I: 9259200-9259386 Caenorhabditis elegans
Exon24843   24   I: 9259778-9259801 Caenorhabditis elegans
Exon24854   147   I: 9259891-9260037 Caenorhabditis elegans
Exon24865   305   I: 9260083-9260387 Caenorhabditis elegans
Exon24876   321   I: 9260777-9261097 Caenorhabditis elegans
Exon24887   351   I: 9261148-9261498 Caenorhabditis elegans
Exon24896   97   I: 9261544-9261640 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F36H2.3k.1 9252074 9261640 -1

1 Sequence

Length
5325

1 Sequence Ontology Term

Identifier Name Description
transcript