WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F36H2.3d.1 Sequence Name  F36H2.3d.1
Length (nt)  3564   Chromosome Location  I: 9254645-9261640
Chromosome . Primary Identifier  I Chromosome Location . Start  9254645
Chromosome Location . End  9261640 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F36H2.3d.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009500 cfh-1 F36H2.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F36H2.3d F36H2.3d 3564   I: 9254645-9254850

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F36H2.3d.1 9254645 9261640 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

16 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon24712   206   I: 9254645-9254850 Caenorhabditis elegans
Exon24720   123   I: 9255037-9255159 Caenorhabditis elegans
Exon24731   495   I: 9255272-9255766 Caenorhabditis elegans
Exon24742   276   I: 9255853-9256128 Caenorhabditis elegans
Exon24753   274   I: 9256178-9256451 Caenorhabditis elegans
Exon24763   210   I: 9256520-9256729 Caenorhabditis elegans
Exon24772   213   I: 9256922-9257134 Caenorhabditis elegans
Exon24804   215   I: 9258782-9258996 Caenorhabditis elegans
Exon24815   93   I: 9259048-9259140 Caenorhabditis elegans
Exon24826   187   I: 9259200-9259386 Caenorhabditis elegans
Exon24836   24   I: 9259778-9259801 Caenorhabditis elegans
Exon24847   174   I: 9259864-9260037 Caenorhabditis elegans
Exon24858   305   I: 9260083-9260387 Caenorhabditis elegans
Exon24869   321   I: 9260777-9261097 Caenorhabditis elegans
Exon24880   351   I: 9261148-9261498 Caenorhabditis elegans
Exon24889   97   I: 9261544-9261640 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F36H2.3d.1 9254645 9261640 -1

1 Sequence

Length
3564

1 Sequence Ontology Term

Identifier Name Description
transcript