WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F14B4.2a.1 Sequence Name  F14B4.2a.1
Length (nt)  1928   Chromosome Location  I: 9271480-9273794
Chromosome . Primary Identifier  I Chromosome Location . Start  9271480
Chromosome Location . End  9273794 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F14B4.2a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008780 hxk-1 F14B4.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F14B4.2a F14B4.2a 1503   I: 9271891-9272013

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F14B4.2a.1 9271480 9273794 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon24918   534   I: 9271480-9272013 Caenorhabditis elegans
Exon24919   844   I: 9272086-9272929 Caenorhabditis elegans
Exon24921   122   I: 9273006-9273127 Caenorhabditis elegans
Exon24923   138   I: 9273176-9273313 Caenorhabditis elegans
Exon24925   68   I: 9273359-9273426 Caenorhabditis elegans
Exon24927   94   I: 9273475-9273568 Caenorhabditis elegans
Exon24929   128   I: 9273667-9273794 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F14B4.2a.1 9271480 9273794 -1

1 Sequence

Length
1928

1 Sequence Ontology Term

Identifier Name Description
transcript