WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F14B4.3.1 Sequence Name  F14B4.3.1
Length (nt)  3784   Chromosome Location  I: 9280923-9286576
Chromosome . Primary Identifier  I Chromosome Location . Start  9280923
Chromosome Location . End  9286576 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F14B4.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008781 rpoa-2 F14B4.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F14B4.3 F14B4.3 3384   I: 9281309-9281605

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F14B4.3.1 9280923 9286576 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon24931   683   I: 9280923-9281605 Caenorhabditis elegans
Exon24932   198   I: 9281887-9282084 Caenorhabditis elegans
Exon24933   109   I: 9282136-9282244 Caenorhabditis elegans
Exon24934   792   I: 9282694-9283485 Caenorhabditis elegans
Exon24935   281   I: 9283672-9283952 Caenorhabditis elegans
Exon24936   126   I: 9284008-9284133 Caenorhabditis elegans
Exon24937   427   I: 9284363-9284789 Caenorhabditis elegans
Exon24938   836   I: 9285192-9286027 Caenorhabditis elegans
Exon24939   144   I: 9286190-9286333 Caenorhabditis elegans
Exon24940   188   I: 9286389-9286576 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F14B4.3.1 9280923 9286576 -1

1 Sequence

Length
3784

1 Sequence Ontology Term

Identifier Name Description
transcript