WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F26H9.1a.1 Sequence Name  F26H9.1a.1
Length (nt)  1900   Chromosome Location  I: 9287443-9289770
Chromosome . Primary Identifier  I Chromosome Location . Start  9287443
Chromosome Location . End  9289770 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F26H9.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009173 prom-1 F26H9.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F26H9.1a F26H9.1a 1527   I: 9287447-9287573

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F26H9.1a.1 9287443 9289770 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon24941   131   I: 9287443-9287573 Caenorhabditis elegans
Exon24942   120   I: 9287622-9287741 Caenorhabditis elegans
Exon24943   111   I: 9287787-9287897 Caenorhabditis elegans
Exon24944   150   I: 9287941-9288090 Caenorhabditis elegans
Exon24945   128   I: 9288137-9288264 Caenorhabditis elegans
Exon24946   177   I: 9288311-9288487 Caenorhabditis elegans
Exon24947   175   I: 9288544-9288718 Caenorhabditis elegans
Exon24948   171   I: 9288762-9288932 Caenorhabditis elegans
Exon24949   140   I: 9288982-9289121 Caenorhabditis elegans
Exon24952   597   I: 9289174-9289770 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F26H9.1a.1 9287443 9289770 1

1 Sequence

Length
1900

1 Sequence Ontology Term

Identifier Name Description
transcript