WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C12C8.3b.2 Sequence Name  C12C8.3b.2
Length (nt)  4613   Chromosome Location  I: 9334806-9341919
Chromosome . Primary Identifier  I Chromosome Location . Start  9334806
Chromosome Location . End  9341919 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C12C8.3b.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003026 lin-41 C12C8.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C12C8.3b C12C8.3b 3432   I: 9335965-9336126

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C12C8.3b.2 9334806 9341919 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

15 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon25103   1321   I: 9334806-9336126 Caenorhabditis elegans
Exon25109   271   I: 9336173-9336443 Caenorhabditis elegans
Exon25113   678   I: 9336491-9337168 Caenorhabditis elegans
Exon25117   213   I: 9337214-9337426 Caenorhabditis elegans
Exon25121   372   I: 9337787-9338158 Caenorhabditis elegans
Exon25125   80   I: 9338208-9338287 Caenorhabditis elegans
Exon25127   302   I: 9338503-9338804 Caenorhabditis elegans
Exon25133   97   I: 9338856-9338952 Caenorhabditis elegans
Exon25137   124   I: 9340020-9340143 Caenorhabditis elegans
Exon25141   272   I: 9340198-9340469 Caenorhabditis elegans
Exon25145   272   I: 9340857-9341128 Caenorhabditis elegans
Exon25149   141   I: 9341176-9341316 Caenorhabditis elegans
Exon25153   50   I: 9341360-9341409 Caenorhabditis elegans
Exon25157   262   I: 9341453-9341714 Caenorhabditis elegans
Exon25161   158   I: 9341762-9341919 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C12C8.3b.2 9334806 9341919 -1

1 Sequence

Length
4613

1 Sequence Ontology Term

Identifier Name Description
transcript