WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C12C8.3b.1 Sequence Name  C12C8.3b.1
Length (nt)  4785   Chromosome Location  I: 9334807-9342496
Chromosome . Primary Identifier  I Chromosome Location . Start  9334807
Chromosome Location . End  9342496 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C12C8.3b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003026 lin-41 C12C8.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C12C8.3b C12C8.3b 3432   I: 9335965-9336126

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C12C8.3b.1 9334807 9342496 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

16 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon25104   1320   I: 9334807-9336126 Caenorhabditis elegans
Exon25108   271   I: 9336173-9336443 Caenorhabditis elegans
Exon25112   678   I: 9336491-9337168 Caenorhabditis elegans
Exon25116   213   I: 9337214-9337426 Caenorhabditis elegans
Exon25120   372   I: 9337787-9338158 Caenorhabditis elegans
Exon25124   80   I: 9338208-9338287 Caenorhabditis elegans
Exon25126   302   I: 9338503-9338804 Caenorhabditis elegans
Exon25132   97   I: 9338856-9338952 Caenorhabditis elegans
Exon25136   124   I: 9340020-9340143 Caenorhabditis elegans
Exon25140   272   I: 9340198-9340469 Caenorhabditis elegans
Exon25144   272   I: 9340857-9341128 Caenorhabditis elegans
Exon25148   141   I: 9341176-9341316 Caenorhabditis elegans
Exon25152   50   I: 9341360-9341409 Caenorhabditis elegans
Exon25156   262   I: 9341453-9341714 Caenorhabditis elegans
Exon25159   152   I: 9341762-9341913 Caenorhabditis elegans
Exon25163   179   I: 9342318-9342496 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C12C8.3b.1 9334807 9342496 -1

1 Sequence

Length
4785

1 Sequence Ontology Term

Identifier Name Description
transcript